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AP-1bZIPThioMac-PU1-ChIP-SeqGSE21512Homer1000 More Information FOS info motif file matrix AP. Web Web Homer 29 was used for de novo motif finding and the found motifs were compared with the known motifs in human and mouse documented in the.

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Web To read-in a HOMER-formatted motif at a minimum the first three fields are required to properly ID the motif.

. Consensus sequence The dominant or likeliest sequence. An important prerequisite for analyzing genomic motifs is that the appropriate genome must by configured for use with HOMER. Web Motif Finding with HOMER with custom background regions ----- HOMER contains a novel motif discovery algorithm that was designed for regulatory element analysis in genomics.

Web Motif Finding with HOMER with target and background regions from peaks --------------------------------------------------- HOMER contains a novel motif discovery algorithm that was. Web HOMER analyzes sequences for enriched motifs. Web Motif Scanning In order to select the proper detection threshold it helps to understand how motifs are scored by HOMER.

Web By default HOMER does not return the locations of each motif found in the motif discovery process. Any given sequence can be scored using the probability. To recover the motif locations you must first select the motifs youre interested.

Web HOMER包含了一个新颖的motif发现算法设计用于在基因组学应用里的调控元件分析这里的元件指DNA而非蛋白质这是一种不同的motif发现算法这意味着.

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